Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936275.1_cds_XP_016481901.1_73177
CDS Infomation

[gene=LOC107802838] [db_xref=GeneID:107802838] [protein=two-component response regulator-like APRR1] [protein_id=XP_016481901.1] [location=join(7788..7920,8656..8817,8905..9038,9450..9611,10791..10887,11910..12868)] [gbkey=CDS]
Sequence

ATGGAGAAGAGTGAGATTGTTAAGAGTGGGGAAGGGTTTATTGATAGGAGTAAAGTGCGG
ATTTTACTGTGTGATAAGGATGCCAAAAGCTCTCAGGAGGTTTTTACGCTCTTGTGCAAA
TGCTCTTATCAAGTGACTTCGGTGAGGTCACCCAGGCAGGTGATTGATGCACTGAATGCT
GAAGGACCTGATATTGATATCATCCTTTCTGAAGTTGACCTTCCTATGTCTAAAGGATAT
AAGATGTTGAAATACATCATGAGGGATAAAGAGCTGAGGCGCATTCCGGTGATCATGATG
TCATCGGAAGATGAAGTCTCTATTGTTGTCAAGTGCCTCAAATTTGGAGCAGCTGACTAC
CTTGTAAAGCCTCTCCGCACTAATGAGCTGTTGAACTTGTGGACTCACATGTGGAGAAGA
AGGCAAATGCTTGGACTAGCAGAGAAGAACATCTTAAGTTATGACTTTGATTTGGTTGTA
TCAGACCCCAGCGATCCTAATAGCACTACTATTTTCTCTGATGATACCGATGATAGGTCC
CGGAAGAGTGTCAATCTGGAAGCATGTCCCTCTATTCAGCAAGAAGACGAGATTAATGCT
TCCACCACTGCTGCTCCTATAGAGACTGCCGTTGTGTTTCCATCCGAGTGTCAGTCTGAC
GTGCCAGGAACTAATGAACGGCAGACAGGACAAATTTCCTTATTTCGTAAGAAGAGTGAA
CTGAAGATAGGTGGGTCCTCGGCCTTCTTTACCTATGTCAAATCAGGCGTGCTTAAAACC
AATGACCAAGGAACAACCTATACCCATGAAAATGTGCCTCAGTTGAGGATTGAAGAGAAG
ACTAATGCAGTCGATGGGCATCTAGAGATTGAAACTCAAATGCAAGTAAATGGAGATGCA
GTTGAAAATAATTCACAAGGCGATGACTATCCAAGTAGTAACAGTTTTCCAGAGTCGTAT
TCCATGGAAAGGTCCTGTACTCCCCCTTTGTCATTAGAGTTAACACAACAGAGGAACTCA
AAGATGGAAGAGTTCTCGCAGGTGTACATGCATCCACGCAATGAAGCTCAGCGTGATGCT
GTGAGTTTTCATGCACAAACTGCTTATTCCTATTTTGTTTCTGGAGCAATGAATCAAGTC
ATGATGCCATCACCACATATTTATCCGAAGAACCTGCAAGATCTCCACAACCATGCTAAT
TCAGCTGTACTTCCTCAATACAATCATATGTCACCTTGTCCCCCTCATATGCATGGGATG
GCATCATTTCCTTACTACCCTATGGGCCTATGCTTACAACCTGGCCAAATGGCAACACCT
CATCAATGGCCTACAATTGGAAATTCGCCTTTGGCTGAGGGTAAGGGGAGCAAAGTTGAT
CGTAGAAAGGCAGCACTTATGAAGTTCAGACAGAAGAGAAAGGAAAGATGTTTTGACAAG
AAGATCAGGTATGTTAACAGAAAAAAGCTGGCAGAACGGAGACCTCGTGTGAGGGGACAG
TTTGTAAGGAAGGTAAATGGTGTGAATGTGGATCTTAATGGGCATCCTGCTTCAGCAGAT
TATGATGAGGAGGAGGAGGAAGAGGATGAGGAGGAACAAACAGGAAATTTTGATTCACCT
GAGGATGATCCATCGATGTGTCTATGA

Peptide Sequence

PEP ID

XP_016481901.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR1 [Nicotiana tabacum]
Sequence

MEKSEIVKSGEGFIDRSKVRILLCDKDAKSSQEVFTLLCKCSYQVTSVRSPRQVIDALNA
EGPDIDIILSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSSEDEVSIVVKCLKFGAADY
LVKPLRTNELLNLWTHMWRRRQMLGLAEKNILSYDFDLVVSDPSDPNSTTIFSDDTDDRS
RKSVNLEACPSIQQEDEINASTTAAPIETAVVFPSECQSDVPGTNERQTGQISLFRKKSE
LKIGGSSAFFTYVKSGVLKTNDQGTTYTHENVPQLRIEEKTNAVDGHLEIETQMQVNGDA
VENNSQGDDYPSSNSFPESYSMERSCTPPLSLELTQQRNSKMEEFSQVYMHPRNEAQRDA
VSFHAQTAYSYFVSGAMNQVMMPSPHIYPKNLQDLHNHANSAVLPQYNHMSPCPPHMHGM
ASFPYYPMGLCLQPGQMATPHQWPTIGNSPLAEGKGSKVDRRKAALMKFRQKRKERCFDK
KIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGHPASADYDEEEEEEDEEEQTGNFDSP
EDDPSMCL

Transcript Sequence

Gene sequence data has not been registered.